CDS
| Accession Number | TCMCG066C29445 |
| gbkey | CDS |
| Protein Id | XP_034604340.1 |
| Location | complement(join(34288134..34288482,34288594..34288667,34288749..34288824,34288934..34289038,34289130..34289272,34289379..34289435,34289542..34289647,34289727..34289855,34289941..34290011,34290136..34290231,34290307..34290423,34290515..34290625,34290720..34290797,34290952..34291116,34291200..34291256,34291392..34291454,34291566..34291685,34291880..34292071,34292155..34292231,34292367..34292472,34292544..34292714)) |
| Gene | LOC117864373 |
| GeneID | 117864373 |
| Organism | Setaria viridis |
Protein
| Length | 820aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA633601 |
| db_source | XM_034748449.1 |
| Definition | 5'-3' exoribonuclease 2-like isoform X1 [Setaria viridis] |
EGGNOG-MAPPER Annotation
| COG_category | AL |
| Description | XRN 5'-3' exonuclease N-terminus |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03009 [VIEW IN KEGG] ko03016 [VIEW IN KEGG] ko03019 [VIEW IN KEGG] ko03021 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12619
[VIEW IN KEGG] ko:K20553 [VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03008
[VIEW IN KEGG] ko03018 [VIEW IN KEGG] ko04016 [VIEW IN KEGG] map03008 [VIEW IN KEGG] map03018 [VIEW IN KEGG] map04016 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGGGATACCTTCTTTCTACAAGTGGCTCGTGACCAGATACCCAAGCATCGTCTCCCCCGCAAAGGAGGAACCAGAGGAGGGCATCATCTTCCACAACCTCTACCTCGACATGAACTGCATCATCCATCCTTGCTTCCACCCGCAGGACCAGATGCACGCAGACGTAGACGTGTGCCCTCCGACAACGGTCAGCGAGGTGTTGGAGTCCATGTTCGAGCACTTGGACCGCCTGTTCCGCATCATCAGGCCGACAAGGCTTCTCTACTTAGCCGTAGATGGCGTTGTTCCATGCGCCAAAATGAATCGAGTGCGACGGGGACGTTTCCACTCTGCCATGCTAGCCACAAGTGAGGCACTTGAAGAGGAAAAAATGCGGAGGGAATTAAGAGAGCAAGGTAAGGAGGTGCCACCGCGAGAGATTTCCGAGGTTTCTGACTCCAATGTCATCACACCAGGGACTGAGTTCATGGAGAAGCTGTCACAAGCGCTCGAGTACTACACCCGTTACAAATTGAATACTGACCCCGGGTGGAAAGACATTATGGTCATACTCTCTGATGCAAATGTGCCCGGAGAAGGAGAGCACAAGATCATGTCTTTCATCCGTGCGCAACGCAGCATGGAAGGCTATGACCCCAACACTCGACACTGCTTGTATGGGCATGATGCAGATTTGATAATGCTTGCTTTGGCATCTCACGAGGTCCACTTCTCTATTTTGCGTGAGGATGTGCTACGCCCAAATCAGGCAGAAACCGAAGGGAATTCGGATAAACCATATCTGTTTTTGAACATATGGGTTCTGAGAGAGTACTTGGAGATTGAGTTGAAGATATTGGACCCAATTTGCGAGCCTGATATTGAGAGGCTAATAGATGACTTCATCTTTATTTGTTTCTTGATGGGAAATGATTTCATCCCACATATTCCATCACTTGAGACGCATGAGGGTGCAGTCCATCTTCTTTTGGAAGTGTACAAAACAACCTTCAACAAAATGGGAGGGTATATTGTCAACACAGATAAAGTGAAAGATAAACATGGTGCATATCTAGAAGTCTCAAGGTTGGAAATATTTTTTCATGAACTGTCCATGTATGAAGAGAAAATTTTTCTCAAAAGATATGAGCTGAAGCAGGATTTGTTGCATAAGGTATATCGCGAAATGTTGAGTGAAGCTTCAGAAAGTGAAAGATCAGAGCTGAGGCGGAAACTAGATGACCGCCTTTTTAATGAAGACCGTCCATATGATAGAATAAGACTGGGATTACCGGGATGGAAATCCCGGTTCCACAGGGAATATTTTGGTGTGGAAACTTCTAATGAAATTGAAAAGCTGCAGAATGACATGGCTGAGAAGTATTTAGAAGGACTTTGCTGGGTGTTTCAATGCTATTTTGCAGGCGTACCATCATGGAGCTGGTACTATCCATTCTACGTTGCTCCTTTCGTATCTGATCTCAAGGGTCTTGCTCGGTTTCAGATATCTTTCACTGTGGACAAACCACTACGACCATTTGATCAGCTCATGGCAGTTTTGCCATCACCAAGCTGGTGTGCTCTCCCAAAATGTTACCACTGGAACTTTTTGTATCGTCGAGAAGATGACTATCCGAAGTTGCAGACTGACACGAAGGGGAAACGTTTCTTGTGGAGTGGTATCTCTGAGGAACTGCTGCTTTCTGCCACTGAAGCGGTAGATGAGAAGCTGACGATGGATGAGGTGAGACGGAATACTACTCGGCAAGACAAGGTCTTTCTGCACAGGAACTCAAACGCTCTGGCACATCTCAAAGAAGTTGTTGTACAGACAACATACTGTTCAGCGCAGAAGCTTCCGATAGATTTAGCTACGAGTGGAATCGGGGGGTGGTTGTCGCCTGATGACAATGATGGCTTGAGCAACAGTTTCTTTCCCTCGCCCATAAAAAATCTGCAGGACATCACAAATGATCAGGCAATATCAGCCATGTTCTTCAATCCTGAGGTAGGGAATCCAATTACAAGGCTACTTAGCGATGTCAGAGTACCTGAGAAGACTGTTTCGGGAGCTGACATCTCAAAGAGGCCACTCTGGCACACGTACCCGGGCTCAAGGCCGCCACCGCCCATCGTTCAGAGGCCGGATTCTATCTGGAAGCCGAGCACGCCGGTGACGCCGCGGGAAGAGCACAAGAACGCCGGAACGGGGTGGATGGGGCGGGGCAGAGGGAATAATGCCATTGCCGCCGCCCAGGCGAAGCTCGCCAGGAGCAGCAGCTACGGGCATGGCACTGCCACCGACACGCCACGGAGCAGCAGCAGCAGCAGCTACAGCTATAGGAAAGGTTTCCATCGGGTGGACATGCCGCATAGCAGAGGAAGCAACAGCAGGTTTGACAACGATGGGGGAGGTGCACCGTGGACAGGGGGAGGCGGCGGCGGCGACCATGCCGCGAGTGCGCAGCCACGCCGTTGGTAG |
| Protein: MGIPSFYKWLVTRYPSIVSPAKEEPEEGIIFHNLYLDMNCIIHPCFHPQDQMHADVDVCPPTTVSEVLESMFEHLDRLFRIIRPTRLLYLAVDGVVPCAKMNRVRRGRFHSAMLATSEALEEEKMRRELREQGKEVPPREISEVSDSNVITPGTEFMEKLSQALEYYTRYKLNTDPGWKDIMVILSDANVPGEGEHKIMSFIRAQRSMEGYDPNTRHCLYGHDADLIMLALASHEVHFSILREDVLRPNQAETEGNSDKPYLFLNIWVLREYLEIELKILDPICEPDIERLIDDFIFICFLMGNDFIPHIPSLETHEGAVHLLLEVYKTTFNKMGGYIVNTDKVKDKHGAYLEVSRLEIFFHELSMYEEKIFLKRYELKQDLLHKVYREMLSEASESERSELRRKLDDRLFNEDRPYDRIRLGLPGWKSRFHREYFGVETSNEIEKLQNDMAEKYLEGLCWVFQCYFAGVPSWSWYYPFYVAPFVSDLKGLARFQISFTVDKPLRPFDQLMAVLPSPSWCALPKCYHWNFLYRREDDYPKLQTDTKGKRFLWSGISEELLLSATEAVDEKLTMDEVRRNTTRQDKVFLHRNSNALAHLKEVVVQTTYCSAQKLPIDLATSGIGGWLSPDDNDGLSNSFFPSPIKNLQDITNDQAISAMFFNPEVGNPITRLLSDVRVPEKTVSGADISKRPLWHTYPGSRPPPPIVQRPDSIWKPSTPVTPREEHKNAGTGWMGRGRGNNAIAAAQAKLARSSSYGHGTATDTPRSSSSSSYSYRKGFHRVDMPHSRGSNSRFDNDGGGAPWTGGGGGGDHAASAQPRRW |